Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 MIR1238-201ENST00000408483 83 ntBASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 AP000692.2-201ENST00000608391 879 ntBASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 AC073912.3-201ENST00000624414 853 ntBASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 FAM207BP-201ENST00000447172 505 ntBASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPHK1Q9NYA1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AC087499.1-201ENST00000418141 1075 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AC097488.1-201ENST00000507834 756 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 DGCR10-201ENST00000609839 495 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AC007952.6-201ENST00000573168 2673 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 AC003957.1-201ENST00000625108 2673 ntBASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPHK1Q9NYA1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 MMP23A-201ENST00000234610 1017 ntBASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPHK1Q9NYA1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms