Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 YBX2P1-201ENST00000394192 760 ntBASIC17.98■□□□□ 0.47
CHD8Q9HCK8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 Z83836.1-201ENST00000624605 1642 ntBASIC17.98■□□□□ 0.47
CHD8Q9HCK8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 SCARNA2-201ENST00000458748 420 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 AC093909.1-201ENST00000504731 1122 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 AL356488.2-201ENST00000602755 427 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 SEC1P-202ENST00000473944 940 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 AC092364.2-202ENST00000597012 1073 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 MIR2861-201ENST00000636310 90 ntBASIC17.97■□□□□ 0.47
CHD8Q9HCK8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD8Q9HCK8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 MED15P5-201ENST00000423150 992 ntBASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 AC145285.3-201ENST00000564603 959 ntBASIC17.96■□□□□ 0.47
CHD8Q9HCK8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 Z69720.1-201ENST00000601483 472 ntBASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD8Q9HCK8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.96■□□□□ 0.46
CHD8Q9HCK8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 AC099336.1-202ENST00000602961 463 ntBASIC17.95■□□□□ 0.46
CHD8Q9HCK8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 DNAJB3-201ENST00000446806 729 ntBASIC17.95■□□□□ 0.46
CHD8Q9HCK8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CHD8Q9HCK8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 IGHV3-47-201ENST00000425060 335 ntBASIC17.94■□□□□ 0.46
CHD8Q9HCK8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 AL157888.1-201ENST00000631930 593 ntBASIC17.94■□□□□ 0.46
CHD8Q9HCK8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD8Q9HCK8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms