Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AC090164.3-201ENST00000610780 2143 ntBASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 PCDHB18P-201ENST00000524813 2368 ntBASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CYP21A1P-202ENST00000354927 1481 ntBASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 AC004854.2-201ENST00000608450 1441 ntBASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 AC123595.1-201ENST00000440769 1046 ntBASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.9□□□□□ -0.34
SND1-IT1Q9HBX3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SND1-IT1Q9HBX3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC12.9□□□□□ -0.35
SND1-IT1Q9HBX3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.9□□□□□ -0.35
SND1-IT1Q9HBX3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SND1-IT1Q9HBX3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 AL161938.1-201ENST00000569833 2180 ntBASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 AL031963.3-201ENST00000606441 850 ntBASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SND1-IT1Q9HBX3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 KRT8P20-201ENST00000423953 1409 ntBASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 AL133373.2-201ENST00000623187 2828 ntBASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms