Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CCDC113Q9H0I3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC113Q9H0I3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.33■■□□□ 1
CCDC113Q9H0I3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 BX088651.1-201ENST00000540551 451 ntBASIC21.32■■□□□ 1
CCDC113Q9H0I3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.32■■□□□ 1
CCDC113Q9H0I3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC113Q9H0I3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.31■■□□□ 1
CCDC113Q9H0I3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC113Q9H0I3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC113Q9H0I3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 RBM17P1-201ENST00000453646 1190 ntBASIC21.3■■□□□ 1
CCDC113Q9H0I3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 Z85996.1-201ENST00000494644 937 ntBASIC21.3■■□□□ 1
CCDC113Q9H0I3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 AC131212.4-201ENST00000623606 975 ntBASIC21.3■■□□□ 1
CCDC113Q9H0I3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC113Q9H0I3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.3■■□□□ 1
CCDC113Q9H0I3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 AC125437.2-201ENST00000625180 2167 ntBASIC21.29■■□□□ 1
CCDC113Q9H0I3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC113Q9H0I3 B3GAT3P1-201ENST00000471720 806 ntBASIC21.29■■□□□ 1
CCDC113Q9H0I3 AC011506.1-201ENST00000474329 610 ntBASIC21.29■■□□□ 1
CCDC113Q9H0I3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.29■■□□□ 1
CCDC113Q9H0I3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms