Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CA6-205ENST00000480186 1493 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC096887.2-201ENST00000623443 1957 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 BMP15-201ENST00000252677 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 Y_RNA.88-201ENST00000363029 99 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 U3.48-201ENST00000363172 216 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC073508.1-201ENST00000428866 656 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL162393.1-201ENST00000437852 946 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 RPL31P3-201ENST00000458430 332 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 RPL7P42-201ENST00000481005 679 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC116359.1-201ENST00000510731 1099 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 TTN-AS1-231ENST00000589434 1066 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 Z98884.2-201ENST00000602406 393 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC027644.3-201ENST00000607978 557 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 FRG1HP-204ENST00000617940 757 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AC091932.2-201ENST00000623014 291 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL031593.1-201ENST00000623197 865 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 AL139424.3-202ENST00000641619 917 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KRTAP3-3Q9BYR6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 C22orf31-201ENST00000216071 995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 Y_RNA.51-201ENST00000362725 102 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 SNX31-202ENST00000428383 1265 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AC027673.1-201ENST00000456245 405 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AC126121.1-201ENST00000482313 553 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 MTCO2P30-201ENST00000503662 364 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CCDC169-213ENST00000510088 1088 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AC025465.4-201ENST00000513422 638 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 MTCO2P32-201ENST00000514865 403 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CCNG2P1-201ENST00000549521 1000 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AC018755.4-201ENST00000619715 454 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 AL357143.2-201ENST00000640266 421 ntBASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 ENOPH1-204ENST00000610545 1542 ntTSL 5 BASIC11.9□□□□□ -0.5
KRTAP3-3Q9BYR6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms