Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.87■□□□□ 0.29
COL12A1Q99715 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.87■□□□□ 0.29
COL12A1Q99715 AC034232.1-201ENST00000506026 1064 ntBASIC16.87■□□□□ 0.29
COL12A1Q99715 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.87■□□□□ 0.29
COL12A1Q99715 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.87■□□□□ 0.29
COL12A1Q99715 AL391422.3-201ENST00000603791 2761 ntBASIC16.87■□□□□ 0.29
COL12A1Q99715 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL12A1Q99715 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
COL12A1Q99715 TUBB8P6-201ENST00000436895 1288 ntBASIC16.86■□□□□ 0.29
COL12A1Q99715 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.86■□□□□ 0.29
COL12A1Q99715 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.86■□□□□ 0.29
COL12A1Q99715 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.86■□□□□ 0.29
COL12A1Q99715 AC106730.1-201ENST00000566722 1090 ntBASIC16.86■□□□□ 0.29
COL12A1Q99715 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL12A1Q99715 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.86■□□□□ 0.29
COL12A1Q99715 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL12A1Q99715 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL12A1Q99715 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.85■□□□□ 0.29
COL12A1Q99715 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.85■□□□□ 0.29
COL12A1Q99715 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
COL12A1Q99715 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 AC099343.3-201ENST00000605834 2503 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL12A1Q99715 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.85■□□□□ 0.29
COL12A1Q99715 TSPY22P-201ENST00000427496 604 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.85■□□□□ 0.29
COL12A1Q99715 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.85■□□□□ 0.29
COL12A1Q99715 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL12A1Q99715 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL12A1Q99715 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.85■□□□□ 0.29
COL12A1Q99715 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.85■□□□□ 0.29
COL12A1Q99715 AC139887.3-201ENST00000568585 713 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 AP001005.1-201ENST00000571755 1248 ntBASIC16.85■□□□□ 0.29
COL12A1Q99715 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.85■□□□□ 0.29
COL12A1Q99715 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.85■□□□□ 0.29
COL12A1Q99715 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL12A1Q99715 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.84■□□□□ 0.29
COL12A1Q99715 AC010327.4-202ENST00000591484 748 ntBASIC16.84■□□□□ 0.29
COL12A1Q99715 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.84■□□□□ 0.29
COL12A1Q99715 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.84■□□□□ 0.29
COL12A1Q99715 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.84■□□□□ 0.29
COL12A1Q99715 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.84■□□□□ 0.29
COL12A1Q99715 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL12A1Q99715 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.84■□□□□ 0.29
COL12A1Q99715 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.84■□□□□ 0.29
COL12A1Q99715 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL12A1Q99715 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms