Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.19■□□□□ 0.82
CDX2Q99626 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.19■□□□□ 0.82
CDX2Q99626 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX2Q99626 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDX2Q99626 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.19■□□□□ 0.82
CDX2Q99626 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX2Q99626 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDX2Q99626 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CDX2Q99626 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX2Q99626 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CDX2Q99626 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDX2Q99626 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.18■□□□□ 0.82
CDX2Q99626 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.18■□□□□ 0.82
CDX2Q99626 AL390719.2-201ENST00000606993 987 ntBASIC20.18■□□□□ 0.82
CDX2Q99626 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.18■□□□□ 0.82
CDX2Q99626 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CDX2Q99626 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX2Q99626 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.17■□□□□ 0.82
CDX2Q99626 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 AC010327.4-202ENST00000591484 748 ntBASIC20.17■□□□□ 0.82
CDX2Q99626 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.17■□□□□ 0.82
CDX2Q99626 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX2Q99626 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX2Q99626 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.17■□□□□ 0.82
CDX2Q99626 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX2Q99626 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX2Q99626 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 RPSAP43-201ENST00000402237 625 ntBASIC20.16■□□□□ 0.82
CDX2Q99626 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.16■□□□□ 0.82
CDX2Q99626 NUS1P2-201ENST00000417358 873 ntBASIC20.16■□□□□ 0.82
CDX2Q99626 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX2Q99626 AC139887.3-201ENST00000568585 713 ntBASIC20.16■□□□□ 0.82
CDX2Q99626 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.16■□□□□ 0.82
CDX2Q99626 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.16■□□□□ 0.82
CDX2Q99626 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 AC083906.6-201ENST00000641366 219 ntBASIC20.16■□□□□ 0.82
CDX2Q99626 AC079781.4-201ENST00000641908 219 ntBASIC20.16■□□□□ 0.82
CDX2Q99626 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.16■□□□□ 0.82
CDX2Q99626 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX2Q99626 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX2Q99626 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDX2Q99626 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CDX2Q99626 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX2Q99626 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDX2Q99626 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDX2Q99626 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.15■□□□□ 0.82
CDX2Q99626 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.15■□□□□ 0.82
CDX2Q99626 HTR5BP-201ENST00000430851 1154 ntBASIC20.15■□□□□ 0.82
CDX2Q99626 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.15■□□□□ 0.82
CDX2Q99626 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.15■□□□□ 0.82
CDX2Q99626 SEC1P-202ENST00000473944 940 ntBASIC20.15■□□□□ 0.82
CDX2Q99626 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX2Q99626 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDX2Q99626 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.15■□□□□ 0.82
CDX2Q99626 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.15■□□□□ 0.82
CDX2Q99626 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDX2Q99626 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.15■□□□□ 0.82
CDX2Q99626 AL049840.3-201ENST00000602669 611 ntBASIC20.15■□□□□ 0.82
CDX2Q99626 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.15■□□□□ 0.82
CDX2Q99626 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.15■□□□□ 0.82
CDX2Q99626 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.15■□□□□ 0.82
CDX2Q99626 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.15■□□□□ 0.82
CDX2Q99626 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX2Q99626 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX2Q99626 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms