Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.07■□□□□ 0.8
CDCA3Q99618 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA3Q99618 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.07■□□□□ 0.8
CDCA3Q99618 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDCA3Q99618 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA3Q99618 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDCA3Q99618 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.06■□□□□ 0.8
CDCA3Q99618 KRT8P10-201ENST00000450021 1447 ntBASIC20.06■□□□□ 0.8
CDCA3Q99618 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.06■□□□□ 0.8
CDCA3Q99618 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDCA3Q99618 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.05■□□□□ 0.8
CDCA3Q99618 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CDCA3Q99618 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDCA3Q99618 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDCA3Q99618 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA3Q99618 AP002383.4-201ENST00000442518 975 ntBASIC20.05■□□□□ 0.8
CDCA3Q99618 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.05■□□□□ 0.8
CDCA3Q99618 KRT8P26-201ENST00000534154 1276 ntBASIC20.05■□□□□ 0.8
CDCA3Q99618 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDCA3Q99618 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA3Q99618 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA3Q99618 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDCA3Q99618 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.05■□□□□ 0.8
CDCA3Q99618 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.05■□□□□ 0.8
CDCA3Q99618 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA3Q99618 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
CDCA3Q99618 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDCA3Q99618 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDCA3Q99618 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDCA3Q99618 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
CDCA3Q99618 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.04■□□□□ 0.8
CDCA3Q99618 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.04■□□□□ 0.8
CDCA3Q99618 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDCA3Q99618 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDCA3Q99618 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDCA3Q99618 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDCA3Q99618 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CDCA3Q99618 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.04■□□□□ 0.8
CDCA3Q99618 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDCA3Q99618 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.04■□□□□ 0.8
CDCA3Q99618 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
CDCA3Q99618 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA3Q99618 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA3Q99618 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.03■□□□□ 0.8
CDCA3Q99618 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDCA3Q99618 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDCA3Q99618 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDCA3Q99618 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.03■□□□□ 0.8
CDCA3Q99618 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms