Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL13Q99616 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL13Q99616 AL049637.2-201ENST00000641778 930 ntBASIC16.15■□□□□ 0.18
CCL13Q99616 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL13Q99616 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL13Q99616 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCL13Q99616 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL13Q99616 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCL13Q99616 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCL13Q99616 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 Z82202.1-201ENST00000623446 1880 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCL13Q99616 AC120498.9-201ENST00000339021 3867 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCL13Q99616 KRT16P1-201ENST00000399124 1418 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 AC104417.2-201ENST00000562989 1793 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCL13Q99616 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 AL160286.2-201ENST00000567150 934 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 CD177P1-201ENST00000606252 935 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 AL445675.2-201ENST00000620291 557 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 AC113410.3-201ENST00000623366 203 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 AC131212.4-201ENST00000623606 975 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 AC093484.2-201ENST00000580996 2166 ntBASIC16.14■□□□□ 0.17
CCL13Q99616 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL13Q99616 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL13Q99616 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.13■□□□□ 0.17
CCL13Q99616 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCL13Q99616 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.13■□□□□ 0.17
CCL13Q99616 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.13■□□□□ 0.17
CCL13Q99616 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCL13Q99616 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCL13Q99616 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL13Q99616 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCL13Q99616 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL13Q99616 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL13Q99616 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL13Q99616 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL13Q99616 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL13Q99616 SDHAP1-207ENST00000440850 2000 ntBASIC16.12■□□□□ 0.17
CCL13Q99616 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCL13Q99616 AC116562.4-201ENST00000641316 2276 ntBASIC16.12■□□□□ 0.17
CCL13Q99616 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms