Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 AL359736.2-201ENST00000621992 437 ntBASIC22.81■■□□□ 1.24
NEK1Q96PY6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.81■■□□□ 1.24
NEK1Q96PY6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
NEK1Q96PY6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 PRORSD1P-201ENST00000295112 541 ntBASIC22.8■■□□□ 1.24
NEK1Q96PY6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 AC093827.2-201ENST00000512654 315 ntBASIC22.8■■□□□ 1.24
NEK1Q96PY6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.8■■□□□ 1.24
NEK1Q96PY6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NEK1Q96PY6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 HTR7P1-201ENST00000538670 1336 ntBASIC22.79■■□□□ 1.24
NEK1Q96PY6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.79■■□□□ 1.24
NEK1Q96PY6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
NEK1Q96PY6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 AL049812.1-201ENST00000432563 2267 ntBASIC22.78■■□□□ 1.24
NEK1Q96PY6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NEK1Q96PY6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
NEK1Q96PY6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.77■■□□□ 1.24
NEK1Q96PY6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
NEK1Q96PY6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
NEK1Q96PY6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC22.76■■□□□ 1.23
NEK1Q96PY6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NEK1Q96PY6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms