Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 AC006128.1-201ENST00000624704 1661 ntBASIC30.7■■■□□ 2.5
PRG4Q92954 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
PRG4Q92954 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 SMG8-203ENST00000578922 2178 ntBASIC30.69■■■□□ 2.5
PRG4Q92954 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PRG4Q92954 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC30.69■■■□□ 2.5
PRG4Q92954 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
PRG4Q92954 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC30.69■■■□□ 2.5
PRG4Q92954 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
PRG4Q92954 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PRG4Q92954 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
PRG4Q92954 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
PRG4Q92954 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PRG4Q92954 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC30.68■■■□□ 2.5
PRG4Q92954 KRT18P13-201ENST00000400056 1290 ntBASIC30.68■■■□□ 2.5
PRG4Q92954 PMS2P1-201ENST00000431037 1228 ntBASIC30.68■■■□□ 2.5
PRG4Q92954 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
PRG4Q92954 RNF126P1-202ENST00000569893 925 ntBASIC30.68■■■□□ 2.5
PRG4Q92954 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 AC117500.6-201ENST00000624871 588 ntBASIC30.68■■■□□ 2.5
PRG4Q92954 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PRG4Q92954 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC30.68■■■□□ 2.5
PRG4Q92954 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PRG4Q92954 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC30.68■■■□□ 2.5
PRG4Q92954 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
PRG4Q92954 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PRG4Q92954 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
PRG4Q92954 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PRG4Q92954 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRG4Q92954 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC30.67■■■□□ 2.5
PRG4Q92954 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC30.67■■■□□ 2.5
PRG4Q92954 PENK-208ENST00000523051 772 ntTSL 5 BASIC30.67■■■□□ 2.5
PRG4Q92954 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRG4Q92954 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PRG4Q92954 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRG4Q92954 EP400NL-214ENST00000641289 2402 ntBASIC30.67■■■□□ 2.5
PRG4Q92954 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 MIR662-201ENST00000384847 95 ntBASIC30.66■■■□□ 2.5
PRG4Q92954 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PRG4Q92954 RPP21-221ENST00000428040 594 ntTSL 2 BASIC30.66■■■□□ 2.5
PRG4Q92954 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 SEC1P-202ENST00000473944 940 ntBASIC30.66■■■□□ 2.5
PRG4Q92954 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC30.66■■■□□ 2.5
PRG4Q92954 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC30.66■■■□□ 2.5
PRG4Q92954 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC30.66■■■□□ 2.5
PRG4Q92954 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRG4Q92954 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 AKR1C7P-201ENST00000305623 895 ntBASIC30.65■■■□□ 2.5
PRG4Q92954 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
PRG4Q92954 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC30.65■■■□□ 2.5
PRG4Q92954 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC30.65■■■□□ 2.5
PRG4Q92954 AC036111.1-201ENST00000533973 1582 ntBASIC30.65■■■□□ 2.5
PRG4Q92954 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC30.65■■■□□ 2.5
PRG4Q92954 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRG4Q92954 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
PRG4Q92954 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC30.64■■■□□ 2.5
PRG4Q92954 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC30.64■■■□□ 2.5
PRG4Q92954 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC30.64■■■□□ 2.5
PRG4Q92954 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
PRG4Q92954 GPAT2P1-201ENST00000444924 1672 ntBASIC30.64■■■□□ 2.5
PRG4Q92954 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC30.64■■■□□ 2.5
PRG4Q92954 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.64■■■□□ 2.5
PRG4Q92954 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PRG4Q92954 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
PRG4Q92954 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC30.64■■■□□ 2.49
PRG4Q92954 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
PRG4Q92954 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC30.64■■■□□ 2.49
PRG4Q92954 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.49
PRG4Q92954 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
PRG4Q92954 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC30.64■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms