Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 Z69720.1-201ENST00000601483 472 ntBASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 COX5BP8-201ENST00000416911 349 ntBASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC004449.1-201ENST00000564240 433 ntBASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 MRPL20P1-201ENST00000400819 433 ntBASIC7.84□□□□□ -1.16
SYNE2Q8WXH0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
SYNE2Q8WXH0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC7.84□□□□□ -1.16
SYNE2Q8WXH0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.16
SYNE2Q8WXH0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AL358472.5-202ENST00000641448 1267 ntBASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC079602.3-201ENST00000623931 403 ntBASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TSPY16P-201ENST00000449843 468 ntBASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC008761.3-201ENST00000624803 892 ntBASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 RNA5SP415-201ENST00000517246 115 ntBASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNE2Q8WXH0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AP005901.3-202ENST00000581653 237 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 BNIP3P18-201ENST00000593976 575 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC129492.6-201ENST00000611383 1305 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AC068473.5-201ENST00000616428 2072 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 HLA-J-201ENST00000462773 1622 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AL031432.2-201ENST00000566714 459 ntBASIC7.82□□□□□ -1.16
SYNE2Q8WXH0 AL928711.1-201ENST00000570165 459 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms