Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 AC104771.1-201ENST00000603335 964 ntBASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RTN4IP1Q8WWV3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTN4IP1Q8WWV3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
RTN4IP1Q8WWV3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTN4IP1Q8WWV3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RTN4IP1Q8WWV3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC005082.1-201ENST00000413042 2259 ntBASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AL138781.1-201ENST00000566567 1274 ntBASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTN4IP1Q8WWV3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 AL161938.1-201ENST00000569833 2180 ntBASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 AC097658.1-201ENST00000475555 843 ntBASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTN4IP1Q8WWV3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTN4IP1Q8WWV3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms