Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 KRT18P57-201ENST00000443599 1254 ntBASIC26.82■■□□□ 1.88
TMC1Q8TDI8 FAM207BP-201ENST00000447172 505 ntBASIC26.82■■□□□ 1.88
TMC1Q8TDI8 NME1-207ENST00000480143 964 ntTSL 2 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC26.82■■□□□ 1.88
TMC1Q8TDI8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 C2orf69P3-201ENST00000565542 1120 ntBASIC26.81■■□□□ 1.88
TMC1Q8TDI8 AL160286.2-201ENST00000567150 934 ntBASIC26.81■■□□□ 1.88
TMC1Q8TDI8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 AL158211.5-201ENST00000623583 2518 ntBASIC26.81■■□□□ 1.88
TMC1Q8TDI8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
TMC1Q8TDI8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 AC113347.1-201ENST00000413321 391 ntBASIC26.8■■□□□ 1.88
TMC1Q8TDI8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TMC1Q8TDI8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 INGX-201ENST00000359239 846 ntBASIC26.79■■□□□ 1.88
TMC1Q8TDI8 ECEL1P2-202ENST00000465689 757 ntBASIC26.79■■□□□ 1.88
TMC1Q8TDI8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 AC092865.7-201ENST00000641832 219 ntBASIC26.79■■□□□ 1.88
TMC1Q8TDI8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.79■■□□□ 1.88
TMC1Q8TDI8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 AL137013.1-201ENST00000432946 1228 ntBASIC26.78■■□□□ 1.88
TMC1Q8TDI8 SLC25A3P1-201ENST00000443844 931 ntBASIC26.78■■□□□ 1.88
TMC1Q8TDI8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TMC1Q8TDI8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 TERF1P1-201ENST00000311003 1181 ntBASIC26.77■■□□□ 1.88
TMC1Q8TDI8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 MFAP1P1-201ENST00000442257 1255 ntBASIC26.77■■□□□ 1.88
TMC1Q8TDI8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TMC1Q8TDI8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms