Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 SNHG9-202ENST00000564014 471 ntBASIC17.45■□□□□ 0.38
CHD6Q8TD26 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 AP005901.3-202ENST00000581653 237 ntBASIC17.45■□□□□ 0.38
CHD6Q8TD26 AL117328.2-201ENST00000624617 1940 ntBASIC17.45■□□□□ 0.38
CHD6Q8TD26 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 YBX1P5-201ENST00000509441 847 ntBASIC17.44■□□□□ 0.38
CHD6Q8TD26 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD6Q8TD26 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD6Q8TD26 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHD6Q8TD26 SIGLEC30P-201ENST00000455569 941 ntBASIC17.44■□□□□ 0.38
CHD6Q8TD26 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHD6Q8TD26 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHD6Q8TD26 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHD6Q8TD26 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 AC015922.1-201ENST00000421102 1152 ntBASIC17.43■□□□□ 0.38
CHD6Q8TD26 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.43■□□□□ 0.38
CHD6Q8TD26 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
CHD6Q8TD26 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHD6Q8TD26 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 Z92544.3-201ENST00000624747 417 ntBASIC17.42■□□□□ 0.38
CHD6Q8TD26 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.42■□□□□ 0.38
CHD6Q8TD26 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHD6Q8TD26 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AC023274.1-201ENST00000418278 595 ntBASIC17.41■□□□□ 0.38
CHD6Q8TD26 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AC254562.1-201ENST00000417586 456 ntBASIC17.41■□□□□ 0.38
CHD6Q8TD26 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 AP002472.1-201ENST00000577490 586 ntBASIC17.41■□□□□ 0.38
CHD6Q8TD26 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHD6Q8TD26 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.41■□□□□ 0.38
CHD6Q8TD26 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms