Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AP001271.2-201ENST00000624018 1556 ntBASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 BX842568.4-201ENST00000421222 227 ntBASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 PLK5-205ENST00000642079 1969 ntBASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ALMS1Q8TCU4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 AC117500.6-201ENST00000624871 588 ntBASIC13□□□□□ -0.33
ALMS1Q8TCU4 AL049796.1-201ENST00000565336 1766 ntBASIC13□□□□□ -0.33
ALMS1Q8TCU4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13□□□□□ -0.33
ALMS1Q8TCU4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13□□□□□ -0.33
ALMS1Q8TCU4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 GPAT2P1-201ENST00000444924 1672 ntBASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 MIR3917-201ENST00000580971 93 ntBASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.99□□□□□ -0.33
ALMS1Q8TCU4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AC074051.2-201ENST00000565115 352 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 MIR7706-201ENST00000613747 67 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 EP400NL-214ENST00000641289 2402 ntBASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.98□□□□□ -0.33
ALMS1Q8TCU4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms