Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 TSPY17P-201ENST00000450329 467 ntBASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 NTF6B-201ENST00000591913 560 ntBASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 BX664615.1-201ENST00000443558 458 ntBASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SLC38A9Q8NBW4 LINC01521-201ENST00000504184 1943 ntBASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AC117947.1-201ENST00000427448 529 ntBASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 CA15P1-201ENST00000481698 905 ntBASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC38A9Q8NBW4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC38A9Q8NBW4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC38A9Q8NBW4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC38A9Q8NBW4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SLC38A9Q8NBW4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 AK4P3-201ENST00000418260 669 ntBASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms