Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
C3orf56Q8N813 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 DPP3P2-201ENST00000416030 1696 ntBASIC15.06■□□□□ 0
C3orf56Q8N813 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C3orf56Q8N813 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
C3orf56Q8N813 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C3orf56Q8N813 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.05■□□□□ 0
C3orf56Q8N813 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C3orf56Q8N813 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C3orf56Q8N813 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C3orf56Q8N813 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
C3orf56Q8N813 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
C3orf56Q8N813 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
C3orf56Q8N813 TSSC2-201ENST00000450217 709 ntBASIC15.05■□□□□ -0
C3orf56Q8N813 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.05■□□□□ -0
C3orf56Q8N813 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 AL121672.3-201ENST00000608644 468 ntBASIC15.05■□□□□ -0
C3orf56Q8N813 AC004263.2-201ENST00000617183 678 ntBASIC15.05■□□□□ -0
C3orf56Q8N813 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.05■□□□□ -0
C3orf56Q8N813 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
C3orf56Q8N813 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
C3orf56Q8N813 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
C3orf56Q8N813 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
C3orf56Q8N813 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.04■□□□□ -0
C3orf56Q8N813 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
C3orf56Q8N813 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.04■□□□□ -0
C3orf56Q8N813 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.04■□□□□ -0
C3orf56Q8N813 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.04■□□□□ -0
C3orf56Q8N813 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.04■□□□□ -0
C3orf56Q8N813 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
C3orf56Q8N813 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.04■□□□□ -0
C3orf56Q8N813 HYMAI.1-201ENST00000620949 238 ntBASIC15.04■□□□□ -0
C3orf56Q8N813 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
C3orf56Q8N813 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
C3orf56Q8N813 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
C3orf56Q8N813 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 KRT8P8-201ENST00000434750 1448 ntBASIC15.03■□□□□ -0
C3orf56Q8N813 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.03■□□□□ -0
C3orf56Q8N813 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.03■□□□□ -0
C3orf56Q8N813 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.03■□□□□ -0
C3orf56Q8N813 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
C3orf56Q8N813 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.03■□□□□ -0
C3orf56Q8N813 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.03■□□□□ -0
C3orf56Q8N813 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C3orf56Q8N813 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms