Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ABCA6Q8N139 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCA6Q8N139 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 AC012615.1-201ENST00000565797 1299 ntBASIC28.62■■■□□ 2.17
ABCA6Q8N139 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC28.62■■■□□ 2.17
ABCA6Q8N139 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.62■■■□□ 2.17
ABCA6Q8N139 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC28.62■■■□□ 2.17
ABCA6Q8N139 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC28.62■■■□□ 2.17
ABCA6Q8N139 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC28.62■■■□□ 2.17
ABCA6Q8N139 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ABCA6Q8N139 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA6Q8N139 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 AP002469.2-201ENST00000531724 424 ntBASIC28.61■■■□□ 2.17
ABCA6Q8N139 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC28.61■■■□□ 2.17
ABCA6Q8N139 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 DRAXINP1-201ENST00000437611 948 ntBASIC28.6■■■□□ 2.17
ABCA6Q8N139 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA6Q8N139 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC28.6■■■□□ 2.17
ABCA6Q8N139 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
ABCA6Q8N139 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA6Q8N139 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA6Q8N139 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 NUS1P1-201ENST00000446295 882 ntBASIC28.59■■■□□ 2.17
ABCA6Q8N139 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AL160237.2-201ENST00000556165 472 ntBASIC28.59■■■□□ 2.17
ABCA6Q8N139 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA6Q8N139 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
ABCA6Q8N139 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA6Q8N139 SPEG-225ENST00000617028 815 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA6Q8N139 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA6Q8N139 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA6Q8N139 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA6Q8N139 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA6Q8N139 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA6Q8N139 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC28.57■■■□□ 2.16
ABCA6Q8N139 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC28.57■■■□□ 2.16
ABCA6Q8N139 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
ABCA6Q8N139 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
ABCA6Q8N139 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA6Q8N139 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA6Q8N139 AP000593.1-201ENST00000393668 712 ntBASIC28.57■■■□□ 2.16
ABCA6Q8N139 MRPL3P1-201ENST00000400109 1033 ntBASIC28.57■■■□□ 2.16
ABCA6Q8N139 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
ABCA6Q8N139 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
ABCA6Q8N139 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA6Q8N139 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms