Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM53Q6P2H8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 AC091874.3-201ENST00000512672 1195 ntBASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM53Q6P2H8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 AL513477.1-201ENST00000602865 2407 ntBASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM53Q6P2H8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM53Q6P2H8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 AC073210.2-201ENST00000430369 194 ntBASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 AC069152.1-201ENST00000438030 544 ntBASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 AC142086.2-201ENST00000569753 217 ntBASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TMEM53Q6P2H8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM53Q6P2H8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms