Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 MIR3180-1-201ENST00000580374 94 ntBASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 MIR3180-3-201ENST00000584616 94 ntBASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC29.23■■■□□ 2.27
CDC42BPAQ5VT25 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 AC007375.3-201ENST00000600936 2314 ntBASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 AC092597.1-201ENST00000487352 616 ntBASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC29.22■■■□□ 2.27
CDC42BPAQ5VT25 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 TCF3P1-201ENST00000423021 1937 ntBASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDC42BPAQ5VT25 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 SEC1P-202ENST00000473944 940 ntBASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 AC099778.1-201ENST00000568593 1911 ntBASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC29.2■■■□□ 2.27
CDC42BPAQ5VT25 AC093525.10-201ENST00000625130 1569 ntBASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
CDC42BPAQ5VT25 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPAQ5VT25 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 GAS2L1P1-201ENST00000420145 1480 ntBASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPAQ5VT25 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms