Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 TPM4P1-201ENST00000436100 807 ntBASIC21.94■■□□□ 1.1
CCNA1P78396 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNA1P78396 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNA1P78396 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNA1P78396 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNA1P78396 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNA1P78396 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.94■■□□□ 1.1
CCNA1P78396 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNA1P78396 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
CCNA1P78396 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNA1P78396 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNA1P78396 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNA1P78396 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCNA1P78396 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNA1P78396 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCNA1P78396 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCNA1P78396 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNA1P78396 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.93■■□□□ 1.1
CCNA1P78396 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.93■■□□□ 1.1
CCNA1P78396 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCNA1P78396 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNA1P78396 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.93■■□□□ 1.1
CCNA1P78396 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCNA1P78396 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.93■■□□□ 1.1
CCNA1P78396 HYMAI.1-201ENST00000620949 238 ntBASIC21.93■■□□□ 1.1
CCNA1P78396 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCNA1P78396 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 CLEC4GP1-201ENST00000596555 870 ntBASIC21.92■■□□□ 1.1
CCNA1P78396 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.92■■□□□ 1.1
CCNA1P78396 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.92■■□□□ 1.1
CCNA1P78396 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNA1P78396 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCNA1P78396 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNA1P78396 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNA1P78396 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNA1P78396 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNA1P78396 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNA1P78396 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNA1P78396 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNA1P78396 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNA1P78396 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
CCNA1P78396 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
CCNA1P78396 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNA1P78396 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNA1P78396 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNA1P78396 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNA1P78396 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCNA1P78396 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCNA1P78396 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms