Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ABCA4P78363 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.58■□□□□ 0.24
ABCA4P78363 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.58■□□□□ 0.24
ABCA4P78363 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.58■□□□□ 0.24
ABCA4P78363 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.58■□□□□ 0.24
ABCA4P78363 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.58■□□□□ 0.24
ABCA4P78363 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 AC140113.3-201ENST00000605663 199 ntBASIC16.58■□□□□ 0.24
ABCA4P78363 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
ABCA4P78363 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ABCA4P78363 AL512408.1-201ENST00000569378 2000 ntBASIC16.57■□□□□ 0.24
ABCA4P78363 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 AC112907.3-201ENST00000577781 2400 ntBASIC16.57■□□□□ 0.24
ABCA4P78363 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ABCA4P78363 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ABCA4P78363 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ABCA4P78363 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ABCA4P78363 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.57■□□□□ 0.24
ABCA4P78363 RN7SL510P-201ENST00000581311 263 ntBASIC16.57■□□□□ 0.24
ABCA4P78363 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.57■□□□□ 0.24
ABCA4P78363 GPALPP1-207ENST00000611650 899 ntBASIC16.57■□□□□ 0.24
ABCA4P78363 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ABCA4P78363 AL157384.1-201ENST00000445995 2473 ntBASIC16.57■□□□□ 0.24
ABCA4P78363 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ABCA4P78363 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
ABCA4P78363 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.56■□□□□ 0.24
ABCA4P78363 AC093458.2-201ENST00000623150 629 ntBASIC16.56■□□□□ 0.24
ABCA4P78363 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ABCA4P78363 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.56■□□□□ 0.24
ABCA4P78363 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.56■□□□□ 0.24
ABCA4P78363 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ABCA4P78363 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ABCA4P78363 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
ABCA4P78363 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ABCA4P78363 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.55■□□□□ 0.24
ABCA4P78363 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.55■□□□□ 0.24
ABCA4P78363 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ABCA4P78363 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.55■□□□□ 0.24
ABCA4P78363 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.55■□□□□ 0.24
ABCA4P78363 AL160286.2-201ENST00000567150 934 ntBASIC16.55■□□□□ 0.24
ABCA4P78363 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.55■□□□□ 0.24
ABCA4P78363 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.55■□□□□ 0.24
ABCA4P78363 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.55■□□□□ 0.24
ABCA4P78363 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCA4P78363 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.55■□□□□ 0.24
ABCA4P78363 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.55■□□□□ 0.24
ABCA4P78363 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ABCA4P78363 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ABCA4P78363 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.54■□□□□ 0.24
ABCA4P78363 HOMER2P1-201ENST00000455653 964 ntBASIC16.54■□□□□ 0.24
ABCA4P78363 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCA4P78363 AC023511.2-201ENST00000618803 211 ntBASIC16.54■□□□□ 0.24
ABCA4P78363 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCA4P78363 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCA4P78363 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ABCA4P78363 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCA4P78363 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms