Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
APOC4P55056 EGLN1P1-201ENST00000531623 762 ntBASIC14.13□□□□□ -0.15
APOC4P55056 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC4P55056 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC4P55056 AC012306.2-201ENST00000609350 630 ntBASIC14.13□□□□□ -0.15
APOC4P55056 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC4P55056 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC4P55056 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC4P55056 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC4P55056 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.13□□□□□ -0.15
APOC4P55056 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
APOC4P55056 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.13□□□□□ -0.15
APOC4P55056 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC4P55056 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
APOC4P55056 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.12□□□□□ -0.15
APOC4P55056 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 AC096733.2-201ENST00000609937 1394 ntBASIC14.12□□□□□ -0.15
APOC4P55056 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.12□□□□□ -0.15
APOC4P55056 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
APOC4P55056 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 LIN28AP1-201ENST00000429574 405 ntBASIC14.12□□□□□ -0.15
APOC4P55056 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.12□□□□□ -0.15
APOC4P55056 AC091390.4-202ENST00000476426 537 ntBASIC14.12□□□□□ -0.15
APOC4P55056 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.12□□□□□ -0.15
APOC4P55056 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.12□□□□□ -0.15
APOC4P55056 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.12□□□□□ -0.15
APOC4P55056 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 AC116562.4-202ENST00000641738 218 ntBASIC14.12□□□□□ -0.15
APOC4P55056 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.12□□□□□ -0.15
APOC4P55056 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
APOC4P55056 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.11□□□□□ -0.15
APOC4P55056 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 SLC25A1P2-201ENST00000430693 912 ntBASIC14.11□□□□□ -0.15
APOC4P55056 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 KRT18P21-201ENST00000515767 1272 ntBASIC14.11□□□□□ -0.15
APOC4P55056 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.11□□□□□ -0.15
APOC4P55056 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.11□□□□□ -0.15
APOC4P55056 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.11□□□□□ -0.15
APOC4P55056 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
APOC4P55056 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
APOC4P55056 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms