Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.91■□□□□ 0.78
PTPN5P54829 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN5P54829 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.91■□□□□ 0.78
PTPN5P54829 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.91■□□□□ 0.78
PTPN5P54829 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN5P54829 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN5P54829 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN5P54829 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PTPN5P54829 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN5P54829 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN5P54829 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN5P54829 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN5P54829 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN5P54829 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTPN5P54829 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN5P54829 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPN5P54829 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN5P54829 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN5P54829 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN5P54829 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN5P54829 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN5P54829 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PTPN5P54829 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN5P54829 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN5P54829 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN5P54829 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN5P54829 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN5P54829 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN5P54829 PRSS44-201ENST00000515154 1146 ntBASIC19.89■□□□□ 0.77
PTPN5P54829 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN5P54829 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN5P54829 AC099778.1-201ENST00000568593 1911 ntBASIC19.89■□□□□ 0.77
PTPN5P54829 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PTPN5P54829 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN5P54829 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN5P54829 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTPN5P54829 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN5P54829 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
PTPN5P54829 AC007663.1-201ENST00000438948 1240 ntBASIC19.88■□□□□ 0.77
PTPN5P54829 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.88■□□□□ 0.77
PTPN5P54829 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN5P54829 C1QL1P1-201ENST00000568105 661 ntBASIC19.88■□□□□ 0.77
PTPN5P54829 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN5P54829 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
PTPN5P54829 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN5P54829 AP000692.2-201ENST00000608391 879 ntBASIC19.88■□□□□ 0.77
PTPN5P54829 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.88■□□□□ 0.77
PTPN5P54829 AC131212.4-201ENST00000623606 975 ntBASIC19.88■□□□□ 0.77
PTPN5P54829 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTPN5P54829 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
PTPN5P54829 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN5P54829 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms