Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.6■□□□□ 0.89
RAD23BP54727 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.6■□□□□ 0.89
RAD23BP54727 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RAD23BP54727 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RAD23BP54727 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.6■□□□□ 0.89
RAD23BP54727 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 AC073195.1-201ENST00000607241 877 ntBASIC20.6■□□□□ 0.89
RAD23BP54727 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.6■□□□□ 0.89
RAD23BP54727 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAD23BP54727 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.59■□□□□ 0.89
RAD23BP54727 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.59■□□□□ 0.89
RAD23BP54727 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RAD23BP54727 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.59■□□□□ 0.89
RAD23BP54727 AL160286.2-201ENST00000567150 934 ntBASIC20.59■□□□□ 0.89
RAD23BP54727 AP006294.2-201ENST00000641667 209 ntBASIC20.59■□□□□ 0.89
RAD23BP54727 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.59■□□□□ 0.89
RAD23BP54727 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAD23BP54727 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
RAD23BP54727 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAD23BP54727 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.58■□□□□ 0.89
RAD23BP54727 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.58■□□□□ 0.89
RAD23BP54727 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAD23BP54727 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAD23BP54727 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAD23BP54727 AC004980.1-204ENST00000429707 299 ntBASIC20.58■□□□□ 0.89
RAD23BP54727 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
RAD23BP54727 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.58■□□□□ 0.89
RAD23BP54727 AC113410.3-201ENST00000623366 203 ntBASIC20.58■□□□□ 0.89
RAD23BP54727 CR392000.1-201ENST00000624770 1228 ntBASIC20.58■□□□□ 0.89
RAD23BP54727 AL049637.2-201ENST00000641778 930 ntBASIC20.58■□□□□ 0.89
RAD23BP54727 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RAD23BP54727 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RAD23BP54727 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.58■□□□□ 0.88
RAD23BP54727 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RAD23BP54727 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAD23BP54727 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAD23BP54727 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAD23BP54727 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAD23BP54727 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAD23BP54727 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.57■□□□□ 0.88
RAD23BP54727 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 KRT16P1-201ENST00000399124 1418 ntBASIC20.57■□□□□ 0.88
RAD23BP54727 FAM197Y1-201ENST00000421178 764 ntBASIC20.57■□□□□ 0.88
RAD23BP54727 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.57■□□□□ 0.88
RAD23BP54727 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.57■□□□□ 0.88
RAD23BP54727 AC066615.1-201ENST00000640911 628 ntBASIC20.57■□□□□ 0.88
RAD23BP54727 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RAD23BP54727 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAD23BP54727 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
RAD23BP54727 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAD23BP54727 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
RAD23BP54727 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAD23BP54727 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAD23BP54727 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 CD177P1-201ENST00000606252 935 ntBASIC20.56■□□□□ 0.88
RAD23BP54727 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.56■□□□□ 0.88
RAD23BP54727 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAD23BP54727 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms