Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR1P51861 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDR1P51861 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.04■□□□□ 0.96
CDR1P51861 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.04■□□□□ 0.96
CDR1P51861 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.04■□□□□ 0.96
CDR1P51861 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.04■□□□□ 0.96
CDR1P51861 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDR1P51861 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDR1P51861 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDR1P51861 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDR1P51861 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.03■□□□□ 0.96
CDR1P51861 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDR1P51861 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.03■□□□□ 0.96
CDR1P51861 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.03■□□□□ 0.96
CDR1P51861 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 MIR718-201ENST00000390190 70 ntBASIC21.03■□□□□ 0.96
CDR1P51861 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.03■□□□□ 0.96
CDR1P51861 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDR1P51861 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.03■□□□□ 0.96
CDR1P51861 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.03■□□□□ 0.96
CDR1P51861 AL121906.2-201ENST00000621597 723 ntBASIC21.03■□□□□ 0.96
CDR1P51861 AC113410.3-201ENST00000623366 203 ntBASIC21.03■□□□□ 0.96
CDR1P51861 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.03■□□□□ 0.96
CDR1P51861 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDR1P51861 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.03■□□□□ 0.96
CDR1P51861 HTR7P1-201ENST00000538670 1336 ntBASIC21.03■□□□□ 0.96
CDR1P51861 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR1P51861 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.02■□□□□ 0.96
CDR1P51861 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.02■□□□□ 0.96
CDR1P51861 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.02■□□□□ 0.96
CDR1P51861 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.02■□□□□ 0.96
CDR1P51861 AL049637.2-201ENST00000641778 930 ntBASIC21.02■□□□□ 0.96
CDR1P51861 AC020763.4-201ENST00000623414 4170 ntBASIC21.02■□□□□ 0.96
CDR1P51861 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDR1P51861 AL691432.2-201ENST00000607222 2038 ntBASIC21.02■□□□□ 0.96
CDR1P51861 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.02■□□□□ 0.95
CDR1P51861 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.01■□□□□ 0.95
CDR1P51861 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR1P51861 AC233702.5-201ENST00000584107 538 ntBASIC21.01■□□□□ 0.95
CDR1P51861 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.01■□□□□ 0.95
CDR1P51861 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR1P51861 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDR1P51861 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR1P51861 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.01■□□□□ 0.95
CDR1P51861 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
CDR1P51861 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 AL162377.1-201ENST00000618844 1793 ntBASIC21■□□□□ 0.95
CDR1P51861 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21■□□□□ 0.95
CDR1P51861 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21■□□□□ 0.95
CDR1P51861 PENK-204ENST00000518770 863 ntTSL 2 BASIC21■□□□□ 0.95
CDR1P51861 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDR1P51861 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDR1P51861 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms