Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
CSNK1A1P48729 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CSNK1A1P48729 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSNK1A1P48729 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CSNK1A1P48729 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSNK1A1P48729 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CSNK1A1P48729 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 HLA-A-209ENST00000638375 975 ntBASIC17.12■□□□□ 0.33
CSNK1A1P48729 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSNK1A1P48729 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
CSNK1A1P48729 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSNK1A1P48729 PRORSD1P-201ENST00000295112 541 ntBASIC17.11■□□□□ 0.33
CSNK1A1P48729 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.11■□□□□ 0.33
CSNK1A1P48729 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms