Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.33■■□□□ 1.65
RXRBP28702 AC092364.2-202ENST00000597012 1073 ntBASIC25.33■■□□□ 1.65
RXRBP28702 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.33■■□□□ 1.65
RXRBP28702 PRKN-208ENST00000610470 531 ntTSL 2 BASIC25.33■■□□□ 1.65
RXRBP28702 PRKN-209ENST00000612485 225 ntTSL 5 BASIC25.33■■□□□ 1.65
RXRBP28702 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.33■■□□□ 1.65
RXRBP28702 AC134684.3-201ENST00000641758 218 ntBASIC25.33■■□□□ 1.65
RXRBP28702 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
RXRBP28702 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.32■■□□□ 1.64
RXRBP28702 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.32■■□□□ 1.64
RXRBP28702 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RXRBP28702 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
RXRBP28702 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC25.32■■□□□ 1.64
RXRBP28702 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.32■■□□□ 1.64
RXRBP28702 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC25.32■■□□□ 1.64
RXRBP28702 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.32■■□□□ 1.64
RXRBP28702 AC027601.4-201ENST00000611259 610 ntBASIC25.32■■□□□ 1.64
RXRBP28702 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RXRBP28702 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC25.32■■□□□ 1.64
RXRBP28702 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.32■■□□□ 1.64
RXRBP28702 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RXRBP28702 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RXRBP28702 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RXRBP28702 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RXRBP28702 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RXRBP28702 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC25.31■■□□□ 1.64
RXRBP28702 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.31■■□□□ 1.64
RXRBP28702 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC25.31■■□□□ 1.64
RXRBP28702 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RXRBP28702 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC25.31■■□□□ 1.64
RXRBP28702 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC25.31■■□□□ 1.64
RXRBP28702 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC25.31■■□□□ 1.64
RXRBP28702 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
RXRBP28702 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC25.31■■□□□ 1.64
RXRBP28702 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RXRBP28702 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RXRBP28702 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RXRBP28702 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RXRBP28702 CALY-203ENST00000368558 825 ntTSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 AC018712.1-201ENST00000455767 687 ntBASIC25.3■■□□□ 1.64
RXRBP28702 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RXRBP28702 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RXRBP28702 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC25.3■■□□□ 1.64
RXRBP28702 IRF8-202ENST00000562492 946 ntTSL 3 BASIC25.3■■□□□ 1.64
RXRBP28702 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC25.3■■□□□ 1.64
RXRBP28702 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC25.3■■□□□ 1.64
RXRBP28702 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
RXRBP28702 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 NSUN5P1-202ENST00000421140 1535 ntBASIC25.29■■□□□ 1.64
RXRBP28702 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
RXRBP28702 NSUN5P2-203ENST00000457352 1529 ntBASIC25.29■■□□□ 1.64
RXRBP28702 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.29■■□□□ 1.64
RXRBP28702 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.29■■□□□ 1.64
RXRBP28702 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 WBP2-203ENST00000433525 928 ntTSL 2 BASIC25.29■■□□□ 1.64
RXRBP28702 SCARNA2-201ENST00000458748 420 ntBASIC25.29■■□□□ 1.64
RXRBP28702 SEC1P-202ENST00000473944 940 ntBASIC25.29■■□□□ 1.64
RXRBP28702 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
RXRBP28702 AL356488.2-201ENST00000602755 427 ntBASIC25.29■■□□□ 1.64
RXRBP28702 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.29■■□□□ 1.64
RXRBP28702 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.29■■□□□ 1.64
RXRBP28702 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RXRBP28702 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC25.28■■□□□ 1.64
RXRBP28702 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.28■■□□□ 1.64
RXRBP28702 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.28■■□□□ 1.64
RXRBP28702 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 AL035633.1-201ENST00000406139 838 ntBASIC25.28■■□□□ 1.64
RXRBP28702 FAM8A3P-201ENST00000427218 844 ntBASIC25.28■■□□□ 1.64
RXRBP28702 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.28■■□□□ 1.64
RXRBP28702 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC25.28■■□□□ 1.64
RXRBP28702 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC25.28■■□□□ 1.64
RXRBP28702 AC005332.3-201ENST00000589904 676 ntBASIC25.28■■□□□ 1.64
RXRBP28702 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RXRBP28702 FAM197Y3-203ENST00000618346 717 ntBASIC25.28■■□□□ 1.64
RXRBP28702 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC25.28■■□□□ 1.64
RXRBP28702 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
RXRBP28702 DPP3P2-201ENST00000416030 1696 ntBASIC25.28■■□□□ 1.64
RXRBP28702 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms