Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD40P25942 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CD40P25942 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 AC104417.2-201ENST00000562989 1793 ntBASIC16.62■□□□□ 0.25
CD40P25942 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 MIR1224-201ENST00000408193 85 ntBASIC16.62■□□□□ 0.25
CD40P25942 TMPOP1-202ENST00000424642 1267 ntBASIC16.62■□□□□ 0.25
CD40P25942 SLC25A1P2-201ENST00000430693 912 ntBASIC16.62■□□□□ 0.25
CD40P25942 AL137013.1-201ENST00000432946 1228 ntBASIC16.62■□□□□ 0.25
CD40P25942 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.62■□□□□ 0.25
CD40P25942 CCR12P-201ENST00000446203 998 ntBASIC16.62■□□□□ 0.25
CD40P25942 ECEL1P2-202ENST00000465689 757 ntBASIC16.62■□□□□ 0.25
CD40P25942 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 RN7SL850P-201ENST00000579959 291 ntBASIC16.62■□□□□ 0.25
CD40P25942 AC116562.4-202ENST00000641738 218 ntBASIC16.62■□□□□ 0.25
CD40P25942 AC092865.7-201ENST00000641832 219 ntBASIC16.62■□□□□ 0.25
CD40P25942 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD40P25942 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CD40P25942 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CD40P25942 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.62■□□□□ 0.25
CD40P25942 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.62■□□□□ 0.25
CD40P25942 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD40P25942 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CD40P25942 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.61■□□□□ 0.25
CD40P25942 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CD40P25942 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.61■□□□□ 0.25
CD40P25942 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 CKBP1-201ENST00000565489 1086 ntBASIC16.61■□□□□ 0.25
CD40P25942 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CD40P25942 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD40P25942 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.61■□□□□ 0.25
CD40P25942 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.61■□□□□ 0.25
CD40P25942 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.61■□□□□ 0.25
CD40P25942 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CD40P25942 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.6■□□□□ 0.25
CD40P25942 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.6■□□□□ 0.25
CD40P25942 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CD40P25942 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CD40P25942 TERF1P1-201ENST00000311003 1181 ntBASIC16.6■□□□□ 0.25
CD40P25942 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.6■□□□□ 0.25
CD40P25942 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.6■□□□□ 0.25
CD40P25942 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.6■□□□□ 0.25
CD40P25942 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD40P25942 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.6■□□□□ 0.25
CD40P25942 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms