Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.25■□□□□ 0.19
APCP25054 AKR1C7P-201ENST00000305623 895 ntBASIC16.25■□□□□ 0.19
APCP25054 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APCP25054 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.25■□□□□ 0.19
APCP25054 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.25■□□□□ 0.19
APCP25054 AC074051.2-201ENST00000565115 352 ntBASIC16.25■□□□□ 0.19
APCP25054 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APCP25054 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.25■□□□□ 0.19
APCP25054 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APCP25054 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APCP25054 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.24■□□□□ 0.19
APCP25054 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APCP25054 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.24■□□□□ 0.19
APCP25054 LINC00265-3P-201ENST00000447588 903 ntBASIC16.24■□□□□ 0.19
APCP25054 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.24■□□□□ 0.19
APCP25054 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APCP25054 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.24■□□□□ 0.19
APCP25054 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APCP25054 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
APCP25054 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APCP25054 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.24■□□□□ 0.19
APCP25054 MIR940-201ENST00000401276 94 ntBASIC16.24■□□□□ 0.19
APCP25054 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.24■□□□□ 0.19
APCP25054 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APCP25054 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
APCP25054 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 AF238378.1-201ENST00000526806 358 ntBASIC16.23■□□□□ 0.19
APCP25054 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.23■□□□□ 0.19
APCP25054 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
APCP25054 AC104819.1-201ENST00000504587 486 ntBASIC16.23■□□□□ 0.19
APCP25054 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.23■□□□□ 0.19
APCP25054 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
APCP25054 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.23■□□□□ 0.19
APCP25054 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.23■□□□□ 0.19
APCP25054 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
APCP25054 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 AC233702.3-201ENST00000578656 1387 ntBASIC16.23■□□□□ 0.19
APCP25054 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
APCP25054 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.23■□□□□ 0.19
APCP25054 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.23■□□□□ 0.19
APCP25054 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
APCP25054 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.23■□□□□ 0.19
APCP25054 AL691403.2-201ENST00000618460 490 ntBASIC16.23■□□□□ 0.19
APCP25054 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.22■□□□□ 0.19
APCP25054 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.22■□□□□ 0.19
APCP25054 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.22■□□□□ 0.19
APCP25054 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.22■□□□□ 0.19
APCP25054 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
APCP25054 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
APCP25054 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.22■□□□□ 0.19
APCP25054 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
APCP25054 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
APCP25054 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
APCP25054 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.22■□□□□ 0.19
APCP25054 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.22■□□□□ 0.19
APCP25054 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.22■□□□□ 0.19
APCP25054 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.22■□□□□ 0.19
APCP25054 AC139887.3-201ENST00000568585 713 ntBASIC16.22■□□□□ 0.19
APCP25054 AC024243.1-201ENST00000609234 778 ntBASIC16.22■□□□□ 0.19
APCP25054 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
APCP25054 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.22■□□□□ 0.19
APCP25054 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
APCP25054 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APCP25054 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
APCP25054 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms