Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBL4AP11441 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.81■□□□□ 0.44
UBL4AP11441 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UBL4AP11441 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBL4AP11441 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.8■□□□□ 0.44
UBL4AP11441 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 Z82202.1-201ENST00000623446 1880 ntBASIC17.8■□□□□ 0.44
UBL4AP11441 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBL4AP11441 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
UBL4AP11441 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 AC128676.1-201ENST00000454392 318 ntBASIC17.8■□□□□ 0.44
UBL4AP11441 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 FAM201B-201ENST00000458407 597 ntBASIC17.8■□□□□ 0.44
UBL4AP11441 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBL4AP11441 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 ZNF815P-204ENST00000434898 1737 ntBASIC17.8■□□□□ 0.44
UBL4AP11441 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.8■□□□□ 0.44
UBL4AP11441 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UBL4AP11441 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBL4AP11441 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 AC005332.7-201ENST00000614046 2005 ntBASIC17.79■□□□□ 0.44
UBL4AP11441 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 AC020916.1-201ENST00000587762 1774 ntBASIC17.79■□□□□ 0.44
UBL4AP11441 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
UBL4AP11441 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.79■□□□□ 0.44
UBL4AP11441 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.79■□□□□ 0.44
UBL4AP11441 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 RN7SL471P-201ENST00000580476 299 ntBASIC17.79■□□□□ 0.44
UBL4AP11441 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.79■□□□□ 0.44
UBL4AP11441 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UBL4AP11441 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBL4AP11441 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.79■□□□□ 0.44
UBL4AP11441 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBL4AP11441 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
UBL4AP11441 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.78■□□□□ 0.44
UBL4AP11441 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.78■□□□□ 0.44
UBL4AP11441 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
UBL4AP11441 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.78■□□□□ 0.44
UBL4AP11441 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBL4AP11441 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBL4AP11441 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.78■□□□□ 0.44
UBL4AP11441 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
UBL4AP11441 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBL4AP11441 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.78■□□□□ 0.44
UBL4AP11441 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.78■□□□□ 0.44
UBL4AP11441 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
UBL4AP11441 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms