Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.75■□□□□ 0.59
GFRA3O60609 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.75■□□□□ 0.59
GFRA3O60609 MIR7706-201ENST00000613747 67 ntBASIC18.75■□□□□ 0.59
GFRA3O60609 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.75■□□□□ 0.59
GFRA3O60609 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.75■□□□□ 0.59
GFRA3O60609 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
GFRA3O60609 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GFRA3O60609 IGHV3-47-201ENST00000425060 335 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 SCARNA2-201ENST00000458748 420 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.74■□□□□ 0.59
GFRA3O60609 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.74■□□□□ 0.59
GFRA3O60609 AL049840.3-201ENST00000602669 611 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 AL356488.2-201ENST00000602755 427 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GFRA3O60609 AC133561.1-201ENST00000568600 2415 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GFRA3O60609 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GFRA3O60609 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
GFRA3O60609 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA3O60609 Z83836.1-201ENST00000624605 1642 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 KRT18P28-201ENST00000453838 1332 ntBASIC18.74■□□□□ 0.59
GFRA3O60609 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.74■□□□□ 0.59
GFRA3O60609 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA3O60609 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA3O60609 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA3O60609 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
GFRA3O60609 MED15P5-201ENST00000423150 992 ntBASIC18.73■□□□□ 0.59
GFRA3O60609 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
GFRA3O60609 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.73■□□□□ 0.59
GFRA3O60609 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.73■□□□□ 0.59
GFRA3O60609 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA3O60609 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.73■□□□□ 0.59
GFRA3O60609 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA3O60609 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
GFRA3O60609 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.72■□□□□ 0.59
GFRA3O60609 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GFRA3O60609 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
GFRA3O60609 YBX2P1-201ENST00000394192 760 ntBASIC18.72■□□□□ 0.59
GFRA3O60609 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
GFRA3O60609 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.72■□□□□ 0.59
GFRA3O60609 DNAJB3-202ENST00000449667 1266 ntBASIC18.72■□□□□ 0.59
GFRA3O60609 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.72■□□□□ 0.59
GFRA3O60609 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.72■□□□□ 0.59
GFRA3O60609 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GFRA3O60609 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.72■□□□□ 0.59
GFRA3O60609 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.72■□□□□ 0.59
GFRA3O60609 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.72■□□□□ 0.59
GFRA3O60609 FAM197Y3-203ENST00000618346 717 ntBASIC18.72■□□□□ 0.59
GFRA3O60609 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.72■□□□□ 0.59
GFRA3O60609 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA3O60609 KRT8P41-201ENST00000533985 1514 ntBASIC18.72■□□□□ 0.59
GFRA3O60609 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.72■□□□□ 0.59
GFRA3O60609 AL391807.1-203ENST00000604392 2365 ntBASIC18.71■□□□□ 0.59
GFRA3O60609 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.71■□□□□ 0.59
GFRA3O60609 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 METTL21AP1-201ENST00000438852 635 ntBASIC18.71■□□□□ 0.59
GFRA3O60609 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 RFPL4AP1-201ENST00000530883 850 ntBASIC18.71■□□□□ 0.59
GFRA3O60609 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA3O60609 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA3O60609 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms