Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COCHO43405 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.95■□□□□ 0.78
COCHO43405 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
COCHO43405 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.94■□□□□ 0.78
COCHO43405 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.94■□□□□ 0.78
COCHO43405 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COCHO43405 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.94■□□□□ 0.78
COCHO43405 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 HMGA1P5-201ENST00000412453 271 ntBASIC19.94■□□□□ 0.78
COCHO43405 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.94■□□□□ 0.78
COCHO43405 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 CA15P1-201ENST00000481698 905 ntBASIC19.94■□□□□ 0.78
COCHO43405 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.94■□□□□ 0.78
COCHO43405 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.94■□□□□ 0.78
COCHO43405 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COCHO43405 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.93■□□□□ 0.78
COCHO43405 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 ATP5G1P1-201ENST00000448724 379 ntBASIC19.93■□□□□ 0.78
COCHO43405 TSPY17P-201ENST00000450329 467 ntBASIC19.93■□□□□ 0.78
COCHO43405 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 AL353719.1-201ENST00000566847 864 ntBASIC19.93■□□□□ 0.78
COCHO43405 AC010653.2-201ENST00000623505 997 ntBASIC19.93■□□□□ 0.78
COCHO43405 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
COCHO43405 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.93■□□□□ 0.78
COCHO43405 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COCHO43405 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COCHO43405 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.92■□□□□ 0.78
COCHO43405 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COCHO43405 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.92■□□□□ 0.78
COCHO43405 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.92■□□□□ 0.78
COCHO43405 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
COCHO43405 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COCHO43405 AC104076.2-201ENST00000448912 469 ntBASIC19.92■□□□□ 0.78
COCHO43405 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.92■□□□□ 0.78
COCHO43405 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COCHO43405 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.92■□□□□ 0.78
COCHO43405 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COCHO43405 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.91■□□□□ 0.78
COCHO43405 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COCHO43405 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.91■□□□□ 0.78
COCHO43405 TSPY23P-201ENST00000440136 739 ntBASIC19.91■□□□□ 0.78
COCHO43405 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 AL049597.2-201ENST00000565575 961 ntBASIC19.91■□□□□ 0.78
COCHO43405 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
COCHO43405 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COCHO43405 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms