Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
RNF223E7ERA6 AC083849.1-201ENST00000615227 514 ntBASIC16■□□□□ 0.15
RNF223E7ERA6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16■□□□□ 0.15
RNF223E7ERA6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 LINC01311-201ENST00000565162 1445 ntBASIC16■□□□□ 0.15
RNF223E7ERA6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16■□□□□ 0.15
RNF223E7ERA6 BX119927.1-201ENST00000636596 1552 ntBASIC16■□□□□ 0.15
RNF223E7ERA6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF223E7ERA6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 GCSHP2-201ENST00000560971 527 ntBASIC15.99■□□□□ 0.15
RNF223E7ERA6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 AP001271.2-201ENST00000624018 1556 ntBASIC15.99■□□□□ 0.15
RNF223E7ERA6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF223E7ERA6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF223E7ERA6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF223E7ERA6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF223E7ERA6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 STARP1-201ENST00000397973 869 ntBASIC15.97■□□□□ 0.15
RNF223E7ERA6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF223E7ERA6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF223E7ERA6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF223E7ERA6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF223E7ERA6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF223E7ERA6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF223E7ERA6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF223E7ERA6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF223E7ERA6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RNF223E7ERA6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF223E7ERA6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms