Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 SPDYE15P-201ENST00000424157 909 ntBASIC18.86■□□□□ 0.61
C4orf47A7E2U8 FAAHP1-202ENST00000446499 1238 ntBASIC18.86■□□□□ 0.61
C4orf47A7E2U8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 NEK4P2-201ENST00000580004 1012 ntBASIC18.86■□□□□ 0.61
C4orf47A7E2U8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
C4orf47A7E2U8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 KRT8P8-201ENST00000434750 1448 ntBASIC18.85■□□□□ 0.61
C4orf47A7E2U8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 UNC93B7-201ENST00000509439 705 ntBASIC18.85■□□□□ 0.61
C4orf47A7E2U8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4orf47A7E2U8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 FP700111.2-201ENST00000619190 1892 ntBASIC18.84■□□□□ 0.61
C4orf47A7E2U8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.84■□□□□ 0.61
C4orf47A7E2U8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 SPDYE13P-201ENST00000445314 798 ntBASIC18.84■□□□□ 0.61
C4orf47A7E2U8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 AC023511.2-201ENST00000618803 211 ntBASIC18.84■□□□□ 0.61
C4orf47A7E2U8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C4orf47A7E2U8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C4orf47A7E2U8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.83■□□□□ 0.6
C4orf47A7E2U8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
C4orf47A7E2U8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C4orf47A7E2U8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.82■□□□□ 0.6
C4orf47A7E2U8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms