Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC163A0A0D9SF12 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 AC016734.2-201ENST00000624325 1377 ntBASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 MIR3180-1-201ENST00000580374 94 ntBASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 MIR3180-3-201ENST00000584616 94 ntBASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC163A0A0D9SF12 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 KRT8P10-201ENST00000450021 1447 ntBASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 AC009237.14-201ENST00000609975 1594 ntBASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC163A0A0D9SF12 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC163A0A0D9SF12 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AL845331.1-201ENST00000424978 1190 ntBASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AC092597.1-201ENST00000487352 616 ntBASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 KRT8P26-201ENST00000534154 1276 ntBASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC163A0A0D9SF12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC163A0A0D9SF12 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms