Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 OR9G4-201ENST00000302957 984 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RNU4-75P-201ENST00000364621 146 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RNA5SP223-201ENST00000365174 120 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RNU6-730P-201ENST00000383954 104 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 SNORA75-201ENST00000384158 137 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 OR8V1P-201ENST00000395193 873 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL359643.1-201ENST00000404109 423 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC245028.1-201ENST00000423259 256 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL035410.1-201ENST00000427409 427 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RPS29P10-201ENST00000439197 166 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 SDCBPP1-201ENST00000440192 890 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 USP9YP12-201ENST00000450481 570 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL033528.1-201ENST00000453780 140 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 SNORD42A-201ENST00000459584 64 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC090142.1-201ENST00000465776 462 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AP001025.2-201ENST00000490908 477 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC112204.1-201ENST00000502591 103 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC108043.1-201ENST00000512696 574 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 HMGN1P9-201ENST00000515212 298 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RNU6-405P-201ENST00000516637 110 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 ZNF519P3-201ENST00000557158 1032 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC090615.1-201ENST00000577519 154 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 NDUFA8P1-201ENST00000605525 367 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 COX6CP4-201ENST00000605798 228 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC109347.2-201ENST00000610220 349 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC244107.2-201ENST00000611773 76 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC087241.4-201ENST00000612441 480 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC087385.3-201ENST00000620477 187 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC073869.10-201ENST00000642016 354 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AC100778.3-201ENST00000580060 1750 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 AL022393.1-201ENST00000625142 1677 ntBASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHGA3Q9Y5H0 NUP58P1-201ENST00000502546 1738 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 TEX21P-201ENST00000447107 1476 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 RNVU1-6-201ENST00000364688 164 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 RNA5SP90-201ENST00000364801 99 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 RNU6-769P-201ENST00000384407 104 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 RPL31P1-201ENST00000398116 372 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 AL049697.2-201ENST00000403708 294 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 FAR2P2-201ENST00000413041 594 ntBASIC4.94□□□□□ -1.62
PCDHGA3Q9Y5H0 AL807761.1-201ENST00000417622 171 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms