Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC091903.1-201ENST00000624322 454 ntBASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHANK2Q9UPX8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AP003122.5-201ENST00000527668 3766 ntBASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 RSL24D1P4-201ENST00000400938 484 ntBASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 Y_RNA.676-201ENST00000516393 96 ntBASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AP001207.2-201ENST00000519490 539 ntBASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 AC019080.5-201ENST00000624891 757 ntBASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHANK2Q9UPX8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 SNORA9.2-201ENST00000365361 133 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 Z98941.1-201ENST00000407764 100 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 RHEBP3-201ENST00000411920 351 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 SRIP2-201ENST00000428470 166 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AP002884.2-201ENST00000471647 395 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AC083906.5-201ENST00000503722 328 ntBASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.53□□□□□ -1.68
SHANK2Q9UPX8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 RNU6-249P-201ENST00000363016 102 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 SNORA70B-201ENST00000384210 135 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 RPL23AP48-201ENST00000406913 488 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AL645937.1-202ENST00000421799 937 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 EEF1B2P7-201ENST00000451177 676 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 RPS20P32-201ENST00000456044 356 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 HMGN1P18-201ENST00000457642 277 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 HIGD1AP13-201ENST00000509878 289 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AC015911.5-201ENST00000587076 451 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 AC024153.1-201ENST00000603103 365 ntBASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK2Q9UPX8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 RNA5SP502-201ENST00000362694 119 ntBASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC017078.1-201ENST00000416146 368 ntBASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC112492.1-201ENST00000449607 712 ntBASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC108078.3-201ENST00000502633 489 ntBASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC114781.4-201ENST00000513707 639 ntBASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK2Q9UPX8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 RNU1-75P-201ENST00000347264 129 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 OR13C3-201ENST00000374781 1108 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 MYL8P-204ENST00000431574 518 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 RN7SKP60-201ENST00000516985 239 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 AC108206.1-201ENST00000570186 4159 ntBASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK2Q9UPX8 U3.12-201ENST00000364498 214 ntBASIC4.49□□□□□ -1.69
SHANK2Q9UPX8 MIR504-201ENST00000385065 83 ntBASIC4.49□□□□□ -1.69
SHANK2Q9UPX8 AL365396.1-201ENST00000430854 671 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms