Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 PCNAP1-202ENST00000595299 752 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC005014.3-201ENST00000605985 190 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC012314.7-201ENST00000619693 93 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 MTND5P11-201ENST00000511037 1812 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 RNU2-65P-201ENST00000410162 185 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC013410.2-201ENST00000422627 201 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 RPS6P14-201ENST00000425165 719 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 MOB1AP1-201ENST00000430903 535 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC023347.2-201ENST00000433994 462 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 TPTE2P6-202ENST00000445572 1007 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 SNORA70.18-201ENST00000516696 98 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 SNORA76.2-201ENST00000517095 137 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 RANP9-201ENST00000519957 271 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 MIR3944-201ENST00000581277 108 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC007687.1-201ENST00000602704 304 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 LLPHP1-201ENST00000603571 367 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC105429.2-201ENST00000610567 517 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC091948.2-201ENST00000636510 279 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 AC244258.1-201ENST00000637553 1071 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 ZNF33CP-201ENST00000432492 2030 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 HSPA8P19-201ENST00000505359 1517 ntBASIC4.26□□□□□ -1.73
CLIP2Q9UDT6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AP000568.1-201ENST00000282964 442 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 SNORA70.4-201ENST00000365509 134 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 RNU2-6P-201ENST00000411404 190 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AL049737.1-201ENST00000413920 1403 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC009237.5-201ENST00000414271 501 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 HMGB3P20-201ENST00000417997 600 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 MTND4P15-201ENST00000437913 1033 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 CYCSP43-201ENST00000438233 310 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 ARL5AP2-201ENST00000444698 533 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 RPL21P23-201ENST00000446654 460 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC010655.1-201ENST00000449336 292 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC073387.1-201ENST00000453261 709 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 RPL21P103-201ENST00000479921 488 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC008489.1-201ENST00000524271 483 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 OR8K2P-201ENST00000524645 927 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 OR5AK3P-201ENST00000527486 1297 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC023161.2-201ENST00000551218 780 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 TRAV15-201ENST00000556680 249 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC092354.2-201ENST00000607786 514 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 RNVU1-4-201ENST00000612985 164 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC015967.1-201ENST00000619893 476 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AC243312.2-201ENST00000623340 601 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 AL392088.2-201ENST00000637607 285 ntBASIC4.25□□□□□ -1.73
CLIP2Q9UDT6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP2Q9UDT6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms