Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC090071.1-201ENST00000507713 644 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 SOD1P3-201ENST00000518682 454 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 MTND1P36-201ENST00000522384 936 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 PTP4A1P6-201ENST00000531034 478 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC092451.2-201ENST00000538746 658 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 CENPUP2-201ENST00000555897 1186 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC244505.7-201ENST00000599675 272 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC120053.1-201ENST00000607706 736 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AP003392.5-201ENST00000607857 415 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC112503.2-201ENST00000609005 552 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AP005229.2-201ENST00000609980 697 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AC019176.2-201ENST00000611579 315 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 AL139089.1-201ENST00000620372 975 ntBASIC3.97□□□□□ -1.77
HPS4Q9NQG7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
HPS4Q9NQG7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HPS4Q9NQG7 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.77
HPS4Q9NQG7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.77
HPS4Q9NQG7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 MIR153-1-201ENST00000384914 90 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL096829.2-201ENST00000446582 742 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 GTF2IP12-201ENST00000456547 356 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC126121.1-201ENST00000482313 553 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC078918.1-201ENST00000498515 228 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL161756.2-201ENST00000604597 246 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC084757.4-201ENST00000616350 526 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AL357559.1-201ENST00000622228 274 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC006065.5-201ENST00000623427 349 ntBASIC3.96□□□□□ -1.78
HPS4Q9NQG7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.96□□□□□ -1.78
HPS4Q9NQG7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC116096.1-201ENST00000566804 2314 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RNU6-354P-201ENST00000383862 107 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RNU6-610P-201ENST00000384264 107 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 SNORA51.12-201ENST00000384448 134 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 MIR199A2-201ENST00000385289 110 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 SNORD65C-201ENST00000390962 71 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 DEFB130D-201ENST00000426866 237 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.95□□□□□ -1.78
HPS4Q9NQG7 HSFY3P-201ENST00000444242 1191 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 MTND1P33-201ENST00000446251 917 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 UBDP1-202ENST00000457888 382 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RNU7-170P-201ENST00000459303 61 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 RPS4XP6-201ENST00000477670 797 ntBASIC3.95□□□□□ -1.78
HPS4Q9NQG7 AC092451.1-201ENST00000480211 153 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms