Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPL37P3-201ENST00000456825 293 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL122001.1-201ENST00000457027 370 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RNA5SP246-201ENST00000458909 119 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC108734.3-201ENST00000481241 1165 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 RPS27P23-201ENST00000487608 251 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC026979.1-201ENST00000492525 396 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC021146.8-201ENST00000507455 733 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC008562.1-201ENST00000521763 330 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AP001317.1-201ENST00000531194 960 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC135001.1-201ENST00000544546 283 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC022655.2-201ENST00000577280 318 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL109653.1-201ENST00000603091 248 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL139286.1-201ENST00000604465 483 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AP003973.1-201ENST00000604639 691 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 DPRXP5-201ENST00000604662 539 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL158042.1-201ENST00000605338 460 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 MIR378J-201ENST00000611988 109 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC243654.2-201ENST00000612843 443 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PCDH9Q9HC56 AL133412.1-201ENST00000380194 2992 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 Z99496.1-201ENST00000469424 1477 ntBASIC4.24□□□□□ -1.73
PCDH9Q9HC56 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 ASNSP1-204ENST00000641977 1664 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RPL32P3-201ENST00000359025 275 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RNU6-560P-201ENST00000364007 108 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 TRGV6-201ENST00000417928 299 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 MRPS36P1-201ENST00000421291 307 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 USP9YP11-201ENST00000427537 717 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RPL7P59-201ENST00000447700 943 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 NUTF2P3-201ENST00000448540 384 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC239809.1-201ENST00000450470 217 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL645939.1-201ENST00000453429 797 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL121877.1-201ENST00000453704 622 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RPS23P7-201ENST00000466210 444 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AF213884.1-201ENST00000488102 463 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC093824.1-201ENST00000508796 343 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 VWA8P1-201ENST00000510889 176 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC099522.1-202ENST00000514718 367 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RNU7-143P-201ENST00000516781 65 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC004217.3-201ENST00000551552 878 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 HIGD1AP17-201ENST00000554576 276 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 MIR3939-201ENST00000582614 106 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC011477.5-201ENST00000586571 259 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL031281.1-201ENST00000604049 488 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC005962.2-201ENST00000611427 652 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC090246.1-201ENST00000616499 426 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AL445567.2-201ENST00000618935 498 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 LARP1BP1-201ENST00000506036 1359 ntBASIC4.23□□□□□ -1.73
PCDH9Q9HC56 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDH9Q9HC56 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 OR5H2-201ENST00000355273 945 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AL161449.1-201ENST00000414531 1199 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC009518.2-201ENST00000418056 731 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms