Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 EIF4A1P11-201ENST00000451239 222 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 PPIAP21-201ENST00000464473 501 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC109486.1-201ENST00000486833 374 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 SETP14-201ENST00000497538 873 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 DSTNP2-201ENST00000504533 515 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 MTND3P5-201ENST00000512798 333 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 SNORA48.10-201ENST00000516965 160 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC106038.2-201ENST00000520706 568 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 ROCK1P1-201ENST00000573767 549 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 MIR4277-201ENST00000578298 84 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 RSL24D1P11-201ENST00000591045 491 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC008687.2-201ENST00000597865 520 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 BPIFA4P-203ENST00000603168 689 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL354760.1-201ENST00000608357 643 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC015908.5-201ENST00000623289 343 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AC026634.1-201ENST00000634369 198 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AL450326.2-201ENST00000421913 1962 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.67
USP29Q9HBJ7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.65□□□□□ -1.67
USP29Q9HBJ7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 CDR1-202ENST00000625883 1485 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 NXPH1-205ENST00000602349 1953 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL672167.1-206ENST00000356293 943 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 RNU1-63P-201ENST00000383902 164 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 RNU6-253P-201ENST00000384730 105 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 CYCSP45-201ENST00000402289 315 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL049693.1-201ENST00000402760 611 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL355379.1-201ENST00000405542 640 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 Z99497.1-201ENST00000421282 135 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL049610.1-201ENST00000423374 372 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 B3GNT2P1-201ENST00000434960 952 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC006511.1-201ENST00000470614 315 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC010424.1-201ENST00000506336 297 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC025674.1-201ENST00000507074 324 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 RPL7L1P13-201ENST00000511702 739 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC015795.1-201ENST00000513669 327 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 RN7SKP122-201ENST00000515923 296 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 RNY4P37-201ENST00000516225 96 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC107918.3-201ENST00000533272 382 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC093519.1-201ENST00000566109 298 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC012435.1-202ENST00000568772 240 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC012213.3-201ENST00000577199 777 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC103792.1-201ENST00000603591 919 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC069304.2-201ENST00000605154 435 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC006270.3-201ENST00000605967 1036 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC091946.2-201ENST00000606105 291 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AL008729.2-201ENST00000606393 473 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC024560.3-201ENST00000608482 349 ntBASIC4.64□□□□□ -1.67
USP29Q9HBJ7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USP29Q9HBJ7 AC120349.2-201ENST00000625002 298 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms