Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNORA74.1-201ENST00000516320 180 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 RN7SKP219-201ENST00000516825 296 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.710-201ENST00000516975 110 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 COX6B1P4-201ENST00000519826 484 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AP004609.2-201ENST00000532177 190 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 TOMM20P1-201ENST00000534518 427 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC068831.4-201ENST00000556118 109 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CYCSP38-201ENST00000559840 322 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC083837.1-201ENST00000565297 2994 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR4308-201ENST00000580634 81 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 RN7SL230P-201ENST00000580835 303 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU4ATAC-201ENST00000580972 127 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CKS1BP3-201ENST00000600888 237 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL26P30-202ENST00000602923 645 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AL080312.2-201ENST00000613001 630 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC024255.1-201ENST00000614376 102 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AP005431.1-201ENST00000618479 319 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AL512652.1-201ENST00000619006 500 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC016745.2-201ENST00000608834 3443 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AP003486.1-201ENST00000525716 3994 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CTAGE11P-201ENST00000451540 2353 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC024587.1-201ENST00000505925 2157 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC027575.3-201ENST00000583058 2747 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 OR55B1P-203ENST00000641518 2602 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 TMCC1P1-201ENST00000518897 1980 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 AC123769.2-201ENST00000624332 5984 ntBASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-3Q9BYR4 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 CDY11P-201ENST00000447168 1651 ntBASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 AC022905.1-201ENST00000503430 3048 ntBASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 AKAP17BP-201ENST00000431706 2719 ntBASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC01616-201ENST00000561816 2280 ntBASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-3Q9BYR4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms