Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.27□□□□□ -1.4
USB1Q9BQ65 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 RNA5SP442-201ENST00000365050 107 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 RNU6-45P-201ENST00000384471 107 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 RNU6-790P-201ENST00000384479 105 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 U3.29-201ENST00000391296 212 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL359694.1-201ENST00000403247 604 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL139156.1-201ENST00000412785 841 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 RPL24P2-201ENST00000421023 475 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AC008753.1-201ENST00000423096 284 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 OSTCP4-201ENST00000424397 449 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 RPSAP65-201ENST00000429660 595 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 RPS19P6-201ENST00000441327 433 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 GAPDHP33-201ENST00000443168 1013 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 RPS16P9-201ENST00000477220 427 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AC066616.1-201ENST00000486795 413 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 OR10G5P-201ENST00000532733 358 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 SIGLEC31P-201ENST00000594237 551 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 MIR1244-1-201ENST00000612829 85 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 MIR1244-3-201ENST00000635744 85 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 MIR1244-2-201ENST00000636449 85 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 MIR1244-4-202ENST00000636813 85 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 AL356585.10-201ENST00000641883 123 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 AC011978.2-201ENST00000569835 2054 ntBASIC6.27□□□□□ -1.41
USB1Q9BQ65 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
USB1Q9BQ65 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USB1Q9BQ65 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AL512353.3-201ENST00000417517 1326 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 CASC19-246ENST00000641625 1606 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 RN7SKP292-201ENST00000365522 317 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 MIR628-201ENST00000385229 95 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 RNU6-1055P-201ENST00000391085 107 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 RNU11-4P-201ENST00000391149 133 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC009518.3-201ENST00000438972 253 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 DAP3P1-201ENST00000441522 278 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 DBIL5P2-201ENST00000443827 253 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 GAPDHP27-201ENST00000447427 1020 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 SLAMF6P1-201ENST00000451067 602 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 RPLP0P1-201ENST00000457002 361 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 Y_RNA.644-201ENST00000459006 113 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC008481.1-201ENST00000463278 396 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 SCARNA6-201ENST00000515982 265 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 RNU6-27P-201ENST00000516146 107 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 Y_RNA.674-201ENST00000516362 113 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 RN7SKP70-201ENST00000516655 271 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC018442.3-201ENST00000523025 183 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC036111.2-201ENST00000533247 901 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AP002770.2-201ENST00000543613 532 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC174048.1-201ENST00000603389 144 ntBASIC6.26□□□□□ -1.41
USB1Q9BQ65 AC006363.1-201ENST00000603806 463 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms