Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR1S1-201ENST00000624470 978 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 AC117529.2-201ENST00000512159 2068 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.65□□□□□ -1.83
SSX3Q99909 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSX3Q99909 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX3Q99909 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX3Q99909 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX3Q99909 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.64□□□□□ -1.83
SSX3Q99909 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SSX3Q99909 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 RNU6-339P-201ENST00000384310 107 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 RNU1-89P-201ENST00000384592 164 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 OR4K6P-201ENST00000416478 897 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 BOLA3P4-201ENST00000418151 400 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX3Q99909 AL356387.2-201ENST00000422272 243 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 RPL21P91-201ENST00000429231 479 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 MTCO1P54-201ENST00000430139 712 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AL365396.1-201ENST00000430854 671 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC005345.1-201ENST00000431868 217 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX3Q99909 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SSX3Q99909 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.64□□□□□ -1.83
SSX3Q99909 EXOSC3P1-201ENST00000448649 500 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 CFTRP1-201ENST00000456646 183 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 RPS23P7-201ENST00000466210 444 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AL136126.1-201ENST00000473603 402 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 RPS4XP13-201ENST00000483219 789 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC090013.1-201ENST00000485147 480 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 RPL21P131-201ENST00000497298 483 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 BOLA3P3-201ENST00000505182 232 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.64□□□□□ -1.83
SSX3Q99909 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.64□□□□□ -1.83
SSX3Q99909 AP000827.1-201ENST00000527814 258 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 SYF2P1-201ENST00000550658 413 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC115286.1-201ENST00000604298 434 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC090948.1-201ENST00000607464 549 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC016597.2-201ENST00000613256 341 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 CYCSP41-201ENST00000616920 296 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC010975.3-201ENST00000618727 978 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSX3Q99909 AC125257.1-201ENST00000560400 2930 ntBASIC3.64□□□□□ -1.83
SSX3Q99909 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX3Q99909 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX3Q99909 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX3Q99909 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SSX3Q99909 Z99496.1-201ENST00000469424 1477 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 OR4A15-201ENST00000314706 1035 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 RNU6-492P-201ENST00000363035 104 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 RNU1-130P-201ENST00000363930 160 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 RNA5SP151-201ENST00000365632 117 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSX3Q99909 SNORD116-12-201ENST00000384468 92 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 MIR659-201ENST00000384963 97 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SSX3Q99909 RNU6-1300P-201ENST00000391046 108 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AL161909.1-201ENST00000397390 712 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 AL035410.1-201ENST00000427409 427 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC073335.1-201ENST00000427776 363 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX3Q99909 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 SEPT7P5-201ENST00000434048 306 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC241584.1-201ENST00000438469 1241 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX3Q99909 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SSX3Q99909 AC079776.3-201ENST00000450665 370 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC012671.1-201ENST00000451912 203 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 AC104073.1-201ENST00000451988 151 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 RPL23AP24-201ENST00000458203 385 ntBASIC3.63□□□□□ -1.83
SSX3Q99909 RN7SL385P-201ENST00000468873 276 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms