Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 SNURFL-201ENST00000309296 343 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 MIR133A2-201ENST00000347538 102 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RNU1-146P-201ENST00000364015 165 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 MIR105-1-201ENST00000385222 81 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL356432.1-201ENST00000405809 419 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC127391.1-201ENST00000411737 98 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 SNRPEP10-201ENST00000420249 274 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL589872.1-201ENST00000426602 288 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL365400.1-201ENST00000431854 640 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-420P-201ENST00000458780 107 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RPS23P7-201ENST00000466210 444 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RPL39P36-201ENST00000490784 156 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC026427.2-201ENST00000506228 536 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 FGF7P4-201ENST00000509595 295 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-445P-201ENST00000516949 107 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC034105.3-201ENST00000565294 442 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 MIR3934-201ENST00000579806 107 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC009597.2-201ENST00000604659 592 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AP001521.1-201ENST00000609150 300 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AL133173.2-201ENST00000614270 90 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC073869.8-201ENST00000641806 335 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 AC090017.1-201ENST00000548612 1779 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 NMD3P1-201ENST00000439704 1488 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SYNGAP1Q96PV0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 THAP12P4-201ENST00000528321 2266 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC083837.1-201ENST00000565297 2994 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-282P-201ENST00000365357 103 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-657P-201ENST00000383904 107 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC104297.1-201ENST00000393779 870 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 OR9R1P-201ENST00000412200 877 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RPEP2-201ENST00000432149 701 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 HMGB3P9-201ENST00000441799 583 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC132479.1-201ENST00000449160 144 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC104634.1-201ENST00000452720 462 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC092647.2-201ENST00000452998 253 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 RPS3AP41-201ENST00000462701 778 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AP002373.2-201ENST00000541631 1060 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 VN1R80P-201ENST00000597126 338 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AL133255.1-201ENST00000606374 441 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 MIR6133-201ENST00000617057 108 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC005858.4-201ENST00000623191 700 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC067931.1-201ENST00000624190 671 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AC100810.6-201ENST00000638068 285 ntBASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SYNGAP1Q96PV0 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms