Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 RPL7P52-201ENST00000449200 742 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 NDUFA12P1-201ENST00000455914 406 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 MTND2P28-201ENST00000457540 1044 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 snoU109.4-201ENST00000458953 143 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC093267.1-201ENST00000489176 961 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 SUMO2P5-201ENST00000506790 245 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC069306.1-201ENST00000507006 843 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 KCTD9P2-201ENST00000512203 1013 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 MTND2P7-201ENST00000521337 640 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC234771.5-201ENST00000600161 514 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AL390838.2-201ENST00000602394 274 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 RPL23AP92-201ENST00000603609 255 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC073387.2-201ENST00000604797 784 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 VIS1.1-201ENST00000610517 203 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 AC008013.2-202ENST00000637965 364 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTP4A1Q93096 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.82□□□□□ -1.8
PTP4A1Q93096 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PTP4A1Q93096 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 MFSD8-216ENST00000641147 4009 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 MIR506-201ENST00000384998 124 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 RNU6-1000P-201ENST00000391066 106 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AP000567.1-201ENST00000406413 156 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC099677.1-201ENST00000420575 175 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC012065.2-201ENST00000421295 375 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 RPEP3-201ENST00000425462 676 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 USP12PY-201ENST00000427677 1064 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC011998.1-201ENST00000433403 117 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 RPL23AP81-201ENST00000455252 467 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 snoU13.1-201ENST00000459157 104 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 RPL21P126-201ENST00000470049 478 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC010625.1-201ENST00000511296 403 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC112206.4-201ENST00000515142 405 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 RN7SKP289-201ENST00000517244 295 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC010376.1-201ENST00000522101 334 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AP003102.1-201ENST00000525638 661 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 OR4P1P-201ENST00000530808 1136 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 EEF1B2P4-201ENST00000551398 348 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AP001029.3-201ENST00000588063 596 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 RPL12P25-202ENST00000598100 674 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC010738.1-201ENST00000604970 987 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC091946.2-201ENST00000606105 291 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC012409.3-201ENST00000611343 981 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC040168.1-201ENST00000623594 991 ntBASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTP4A1Q93096 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
PTP4A1Q93096 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A1Q93096 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTP4A1Q93096 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms