Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA4DQ92854 AL139089.1-201ENST00000620372 975 ntBASIC4.17□□□□□ -1.74
SEMA4DQ92854 AC079684.1-201ENST00000621405 437 ntBASIC4.17□□□□□ -1.74
SEMA4DQ92854 ZNF663P-202ENST00000641770 1131 ntBASIC4.17□□□□□ -1.74
SEMA4DQ92854 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA4DQ92854 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
SEMA4DQ92854 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.17□□□□□ -1.74
SEMA4DQ92854 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA4DQ92854 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA4DQ92854 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA4DQ92854 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 GSTA8P-201ENST00000404253 637 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 RNU6-272P-201ENST00000411028 104 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 VPS26BP1-201ENST00000417155 755 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 ELOCP9-201ENST00000418624 239 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 MTCO1P3-201ENST00000429327 192 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC004865.1-201ENST00000442276 1003 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 RAB11AP1-201ENST00000442978 646 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 HMGB1P16-201ENST00000447155 540 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC079776.3-201ENST00000450665 370 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC068587.2-201ENST00000478386 781 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC069499.1-201ENST00000489433 509 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AF279873.1-201ENST00000523393 313 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 OR8R1P-201ENST00000543943 764 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC023050.2-201ENST00000544968 387 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC009097.3-201ENST00000563557 1018 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AP001269.3-201ENST00000588718 329 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 GAS5-AS1-201ENST00000602767 694 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC091488.1-201ENST00000604239 660 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 AC013470.4-201ENST00000619978 986 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 FP236240.3-201ENST00000623061 327 ntBASIC4.16□□□□□ -1.74
SEMA4DQ92854 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA4DQ92854 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SEMA4DQ92854 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SEMA4DQ92854 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.15□□□□□ -1.74
SEMA4DQ92854 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEMA4DQ92854 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SEMA4DQ92854 SNORD116.1-201ENST00000365628 92 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 U1.1-201ENST00000384101 164 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 RNU6-413P-201ENST00000384115 107 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 HSPD1P16-201ENST00000402302 394 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 HMGB1P49-201ENST00000418882 569 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 Z93242.1-201ENST00000427102 353 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 MTND1P26-201ENST00000440488 538 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AL591719.1-201ENST00000444669 744 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC104306.1-201ENST00000449702 371 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 HMGB3P21-201ENST00000452483 547 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 OR9M1P-201ENST00000459641 921 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC096992.1-201ENST00000459808 709 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 RPL21P71-201ENST00000465598 459 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 MTND6P6-201ENST00000478031 263 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC021146.5-201ENST00000503544 545 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 MTCYBP35-201ENST00000503630 1137 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 RAC1P2-201ENST00000511164 579 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 RNA5SP208-201ENST00000516156 78 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 DEFB109D-201ENST00000529497 240 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC090695.1-201ENST00000561269 1222 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC021749.1-201ENST00000604322 607 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC092106.3-201ENST00000611308 722 ntBASIC4.15□□□□□ -1.75
SEMA4DQ92854 AC024257.5-201ENST00000612739 531 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms