Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RNU2-37P-201ENST00000410695 177 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RPS3AP25-201ENST00000411660 793 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 HMGN1P24-201ENST00000412282 298 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RPS24P8-201ENST00000431490 402 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AL392003.1-201ENST00000434394 243 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AL031663.1-201ENST00000437445 219 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RN7SL601P-201ENST00000471221 293 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 TMED11P-201ENST00000479478 690 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 RPL7P38-201ENST00000488396 739 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC021146.5-201ENST00000503544 545 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC004024.1-201ENST00000549244 247 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC092868.3-201ENST00000560515 784 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 MIR3944-201ENST00000581277 108 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC103710.3-201ENST00000608157 948 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC005021.1-201ENST00000608730 355 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 AC244100.1-202ENST00000621554 382 ntBASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC12Q8WUD4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 MIR153-1-201ENST00000384914 90 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 MIR34B-201ENST00000385076 84 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 Z99127.3-201ENST00000448158 395 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 AL136097.1-201ENST00000456945 913 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 HMGN1P18-201ENST00000457642 277 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC12Q8WUD4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC004972.1-201ENST00000623934 2209 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 SNORA63.1-201ENST00000362493 131 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 RNU6-805P-201ENST00000365643 106 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AL158156.1-201ENST00000422509 473 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AL031736.2-201ENST00000426573 787 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 MTCO1P45-201ENST00000431457 267 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 ELOCP11-201ENST00000436690 332 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 CST9LP2-201ENST00000437612 320 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 ELOCP16-201ENST00000444494 332 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 HIGD1AP18-201ENST00000520730 278 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC006518.1-201ENST00000541449 943 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 UBE2NP1-201ENST00000545592 458 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 CKS1BP3-201ENST00000600888 237 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AL162713.1-201ENST00000604480 262 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 MIR7973-1-201ENST00000614683 76 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 AC015726.3-201ENST00000624501 418 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC12Q8WUD4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
CCDC12Q8WUD4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 RNU1-70P-201ENST00000362618 164 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 RNA5SP267-201ENST00000364893 126 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 AL606490.8-201ENST00000441624 319 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 AC125238.1-201ENST00000448842 249 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 MTND2P8-201ENST00000450555 1025 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 RPS20P32-201ENST00000456044 356 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 SNRPGP3-201ENST00000469405 227 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 TXNP6-201ENST00000510190 310 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 AC074250.1-201ENST00000511117 192 ntBASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC12Q8WUD4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms